Journal Club

Rubenstein DR, Agren JA, Carbone L, Elde NC, Hoekstra HE, Kapheim KM, Keller L, Moreau CS, Toth AL, Yeaman S, Hofmann HA (2019). Coevolution of genome grchitecture and social behavior. Trends in Ecology & Evolution 34: 844-855, doi: 10.1016/j.tree.2019.04.011, download pdf
Warner RR, Chesson PL (1985). Coexistence mediated by recruitment fluctuations: A field guide to the storage effect. The American Naturalist 125: 769-787, doi: 10.1086/284379, download pdf
Sommer RJ (2020). Phenotypic plasticity: From theory and genetics to current and future challenges. Genetics 215: 1-13, doi: 10.1534/genetics.120.303163, download pdf
Lynch M (2007). The frailty of adaptive hypotheses for the origins of organismal complexity. Genetics 215: 1-13, doi: 10.1073/pnas.0702207104, download pdf
Hastings A, Abbott KC, Cuddington K, Francis T, Gellner G, Lai YC, Morozov A, Petrovskii S, Scranton K, Zeeman ML (2018). Transient phenomena in ecology. Science 361: 990, doi: 10.1126/science.aat6412, download pdf
Rudman SM, Greenblum SI, Rajpurohit S, Betancourt NJ, Hanna J, Tilk S, Yokoyama T, Petrov DA, Schmidt P (2022). Direct observation of adaptive tracking on ecological time scales in Drosophila. Science 375: 1246, doi: 10.1126/science.abj7484, download pdf
Kimura M (1995). Limitations of Darwinian selection in a finite population. PNAS 92: 2343-2344, doi: 10.1073/pnas.92.6.2343 , download pdf
Pearl J (2019). The seven tools of causal inference, with reflections on machine learning. Communications of the ACM 62: 54-60, doi: 10.1145/3241036, download pdf
Badyaev AV, Posner AB, Morrison ES, Higginson DM (2019). Cycles of external dependency drive evolution of avian carotenoid networks. Nature Communications 10: 1596, doi: 10.1038/s41467-019-09579-y, download pdf
Pen I, Flatt T (2021). Asymmetry, division of labour and the evolution of ageing in multicellular organisms. Phil. Trans. R. Soc. B 376: 20190729, doi: 10.1098/rstb.2019.0729, download pdf
Feiner N, Brun-Usan M, Uller T (2021). Evolvability and evolutionary rescue. Evolution & Development e12374, doi: 10.1111/ede.12374, download pdf
Brun-Usan M, Rago A, Thies C, Uller T, Watson RA (2020). Developmental models reveal the role of phenotypic plasticity in explaining genetic evolvability. bioRxiv doi: 10.1101/2020.06.29.179226 , download pdf
DiNuzzo ER, Griffen BD (2020). The effect of animal personality on the ideal free distribution. PNAS 287: 20201095, doi: 10.1098/rspb.2020.1095 , download pdf
see the commentary by the members of the MARM group: Netz C, Ramesh A, Gismann J, Gupte PR, Weissing FJ (2022). Details matter when modelling the effects of animal personality on the spatial distribution of foragers. Proc R Soc B, doi: 10.1098/rspb.2021.0903, download pdf
Xue BK, Sartori P, Leibler S (2019). Environment-to-phenotype mapping and adaptation strategies in varying environments. PNAS 116: 13847-13855, doi: 10.1073/pnas.1903232116 , download pdf
Blokhuis A, Lacoste D, Nghe P (2020). Universal motifs and the diversity of autocatalytic systems. PNAS 117: 25230-25236, doi: 10.1073/pnas.2013527117 , download pdf
Pen I, Weissing FJ (2000). Towards a unified theory of cooperative breeding: the role of ecology and life history re-examined. Proceedings of the Royal Society B 267, 2411-2418, doi: 10.1098/rspb.2000.1299 , download pdf
Leimar O (2020). The evolution of social dominance through reinforcement learning. BioRxiv, doi: 10.1101/2020.07.23.218040 , download pdf
Riedl R (1977). A systems-analytical approach to macro-evolutionary phenomena. The Quarterly Review of Biology 52:351-370, doi: 10.1086/41012 , download pdf
Pradhan GR, Tennie C, van Schaik CP (2012). Social organization and the evolution of cumulative technology in apes and huminins. Journal of Human Evolution 63: 180e190, doi: 10.1016/j.jhevol.2012.04.008 , download pdf
Brun-Usan M, Thies C, Watson RA (2020). How to fit in: The learning principles of cell differentiation. PLoS Computational Biology 16: e1006811, doi: 10.1371/journal.pcbi.1006811 , download pdf
Masel J, Siegal ML (2009). Robustness: mechanisms and consequences. Trends in Genetics 25:395-403, doi: 10.1016/j.tig.2009.07.005 , download pdf
Pigliucci M (2003). Phenotypic integration: studying the ecology and evolution of complex phenotypes. Ecology Letters 6: 265–272, doi: 10.1046/j.1461-0248.2003.00428.x , download pdf
Rebar D, Bailey NW, Jarrett BJM, Kilner RM (2020). An evolutionary switch from sibling rivalry to sibling cooperation, caused by a sustained loss of parental care. PNAS 117: 2544-2550, doi: 10.1073/pnas.1911677117 , download pdf
Hillaert J, Vandegehuchte ML, Hovestadt T, Bonte D (2020). Habitat loss and fragmentation increase realized predator-prey body size ratios. Functional Ecology 34:534-544, doi: 10.1111/1365-2435.13472 , download pdf
Levecque K, Anseel F, de Beuckelaer A, van der Heyden J, Gisle L (2017). Work organisation and mental health problems in PhD students. Research Policy 46: 868-879, doi: 10.1016/j.respol.2017.02.008 , download pdf
Millikan RG (1995). What is behaviour? A philosophical essay on Ethology and individualism in Psychology, Part 1. in White Queen Psychology and Other Essays for Alice, The MIT Press, download pdf
de Oliveira VM, Campos PRA (2019). The emergence of division of labour in a structured response threshold model. . Physica A 517:153-162, doi: 10.1016/j.physa.2018.11.023 , download pdf
de Regt HW (2017). Models and mechanisms. in Understanding Scientific Understanding, Oxford University Press
Pontes AC, Mobley RB, Ofria C, Adami C, Dyer FC (2020). The evolutionary origins of associative learning. The American Naturalist 195: E1-E19, doi: 10.1086/706252 , download pdf
Lässig M, Mustonen V, Walczak AM (2017). Predicting evolution. Nature Ecology & Evolution 1: 0077, doi: 10.1038/s41559-017-0077 , download pdf
Smolla M, Akcay E (2019). Cultural selection shapes network structure. Science Advances 5: eaaw0609, doi: 10.1126/sciadv.aaw0609 , download pdf
Henrich J, Boyd R (2002). On Modeling Cognition and Culture. Why cultural evolution does not require replication of representations. Journal of Cognition and Culture 2: 87-112, doi: 10.1163/156853702320281836, download pdf
Simpson SJ, Sword GA, Lo N (2011). Polyphenism in insects. Current Biology 21: R738-R749, doi: 10.1016/j.cub.2011.06.006, download pdf
Duckworth RA, Potticary AL, Badyaev AV (2018). On the origins of adaptive behavioral complexity: Developmental channeling of structural trade-offs. Advances in the Study of Behavior 50, 1-36, doi: 10.1016/bs.asb.2017.10.001, download pdf
Noble DWA, Radersma R, Uller T (2009). Plastic responses to novel environments are biased towards phenotype dimensions with high additive genetic variation. PNAS 106: 13452-13461, doi: 10.1073/pnas.1821066116, download pdf
Sutter M, Kawecki TJ (2009). Influence of learning on range expansion and adaptation to novel habitats. Journal of Evolutionary Biology 22: 2201-2214, doi: 10.1111/j.1420-9101.2009.01836.x, download pdf
Petrie M, Roberts G (2007). Sexual selection and the evolution of evolvability. Heredity 98: 198-205, doi: doi:0018-067X/07, download pdf
Gavrilets S (2010). High-Dimensional Fitness Landscapes and Speciation. in Evolution – The Extended Synthesis, eds. Pigliucci M, Müller GB, The MIT press, Cambridge, Massachusets
Cenzer M, M’Gonigle LK (2019). Local adaptation in dispersal in multi-resource landscapes. Evolution 73-4: 648–660, doi: 10.1111/evo.13691, download pdf
Cuypers TD, Rutten JP, Hogeweg P (2017). Evolution of evolvability and phenotypic plasticity in virtual cells. BMC Evolutionary Biology 17: 60, doi: 10.1186/s12862-017-0918-y, download pdf
Pigliucci M (2008). Is evolvability evolvable? Nature Reviews Genetics 9: 75-82, doi: 10.1038/nrg2278, download pdf
Love AC (2017). Evo-devo and the structure(s) of evolutionary theory. In: Challenging the Modern Synthesis: Adaptation, Development, and Inheritance, eds Huneman & Walsh, Oxford University Press, doi: 10.1093/oso/9780199377176.001.0001/oso-9780199377176-chapter-5
Henrich J, McElreath R (2003). The evolution of cultural evolution. Evolutionary Anthropology 12: 123-135, doi: 10.1002/evan.10110, download pdf
Pruitt JN, Goodnight CJ (2014). Site-specific group selection drives locally adapted group compositions. Nature 514: 359-362, doi: 10.1038/nature13811, download pdf and discussion
McNamara JM, Houston AI (2009). Integrating function and mechanism. Trends in Ecology and Evolution 24(12): 670-675, doi: 10.1016/j.tree.2009.05.011, download pdf, view discussion summary
Fawcett TW, Hamblin S, Giraldeau L-A (2012). Exposing the behavioral gambit: The evolution of learning and decision rules. Behavioural Ecology 24(1): 2-11, doi: 10.1093/beheco/ars085, download pdf, view discussion summary
English S, Pen I, Shea N, Uller T (2015). The information value of non-genetic inheritance in plants and animals. PLoS ONE 10(1): e0116996, doi: 10.1371/journal.pone.0116996, download pdf
Watson RA, Szathmáry E (2016). How can evolution learn? Trends in Ecology and Evolution 31: 147-157, doi: 10.1016/j.tree.2015.11.009, download pdf, view discussion summary
Gerhart J, Kirschner M (2007). The theory of facilitated variation. PNAS 104 (suppl 1) 8582-8589, doi: 10.1073/pnas.0701035104, download pdf
Botero CA, Weissing FJ, Wright J, Rubenstein DR (2015). Evolutionary tipping points in the capacity to adapt to environmental change. PNAS 112(1): 184-189, doi: 10.1073/pnas.14085891115, download pdf